Three-dimensional (3D) ultrasound imaging technique has been applied for scoliosis assessment, but current assessment method only uses coronal projection image and cannot illustrate the 3D deformity and vertebra rotation. The vertebra detection is essential to reveal 3D spine information, but the detection task is challenging due to complex data and limited annotations. We propose VertMatch, a two-step framework to detect vertebral structures in 3D ultrasound volume by utilizing unlabeled data in semi-supervised manner. The first step is to detect the possible positions of structures on transverse slice globally, and then the local patches are cropped based on detected positions. The second step is to distinguish whether the patches contain real vertebral structures and screen the predicted positions from the first step. VertMatch develops three novel components for semi-supervised learning: for position detection in the first step, (1) anatomical prior is used to screen pseudo labels generated from confidence threshold method; (2) multi-slice consistency is used to utilize more unlabeled data by inputting multiple adjacent slices; (3) for patch identification in the second step, the categories are rebalanced in each batch to solve imbalance problem. Experimental results demonstrate that VertMatch can detect vertebra accurately in ultrasound volume and outperforms state-of-the-art methods. VertMatch is also validated in clinical application on forty ultrasound scans, and it can be a promising approach for 3D assessment of scoliosis.
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Fine-grained classification and counting of bone marrow erythroid cells are vital for evaluating the health status and formulating therapeutic schedules for leukemia or hematopathy. Due to the subtle visual differences between different types of erythroid cells, it is challenging to apply existing image-based deep learning models for fine-grained erythroid cell classification. Moreover, there is no large open-source datasets on erythroid cells to support the model training. In this paper, we introduce BMEC (Bone Morrow Erythroid Cells), the first large fine-grained image dataset of erythroid cells, to facilitate more deep learning research on erythroid cells. BMEC contains 5,666 images of individual erythroid cells, each of which is extracted from the bone marrow erythroid cell smears and professionally annotated to one of the four types of erythroid cells. To distinguish the erythroid cells, one key indicator is the cell shape which is closely related to the cell growth and maturation. Therefore, we design a novel shape-aware image classification network for fine-grained erythroid cell classification. The shape feature is extracted from the shape mask image and aggregated to the raw image feature with a shape attention module. With the shape-attended image feature, our network achieved superior classification performance (81.12\% top-1 accuracy) on the BMEC dataset comparing to the baseline methods. Ablation studies also demonstrate the effectiveness of incorporating the shape information for the fine-grained cell classification. To further verify the generalizability of our method, we tested our network on two additional public white blood cells (WBC) datasets and the results show our shape-aware method can generally outperform recent state-of-the-art works on classifying the WBC. The code and BMEC dataset can be found on https://github.com/wangye8899/BMEC.
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Dense retrievers have made significant strides in obtaining state-of-the-art results on text retrieval and open-domain question answering (ODQA). Yet most of these achievements were made possible with the help of large annotated datasets, unsupervised learning for dense retrieval models remains an open problem. In this work, we explore two categories of methods for creating pseudo query-document pairs, named query extraction (QExt) and transferred query generation (TQGen), to augment the retriever training in an annotation-free and scalable manner. Specifically, QExt extracts pseudo queries by document structures or selecting salient random spans, and TQGen utilizes generation models trained for other NLP tasks (e.g., summarization) to produce pseudo queries. Extensive experiments show that dense retrievers trained with individual augmentation methods can perform comparably well with multiple strong baselines, and combining them leads to further improvements, achieving state-of-the-art performance of unsupervised dense retrieval on both BEIR and ODQA datasets.
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Vision Transformers (ViTs) outperforms convolutional neural networks (CNNs) in several vision tasks with its global modeling capabilities. However, ViT lacks the inductive bias inherent to convolution making it require a large amount of data for training. This results in ViT not performing as well as CNNs on small datasets like medicine and science. We experimentally found that masked autoencoders (MAE) can make the transformer focus more on the image itself, thus alleviating the data-hungry issue of ViT to some extent. Yet the current MAE model is too complex resulting in over-fitting problems on small datasets. This leads to a gap between MAEs trained on small datasets and advanced CNNs models still. Therefore, we investigated how to reduce the decoder complexity in MAE and found a more suitable architectural configuration for it with small datasets. Besides, we additionally designed a location prediction task and a contrastive learning task to introduce localization and invariance characteristics for MAE. Our contrastive learning task not only enables the model to learn high-level visual information but also allows the training of MAE's class token. This is something that most MAE improvement efforts do not consider. Extensive experiments have shown that our method shows state-of-the-art performance on standard small datasets as well as medical datasets with few samples compared to the current popular masked image modeling (MIM) and vision transformers for small datasets.The code and models are available at https://github.com/Talented-Q/SDMAE.
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Federated learning enables cooperative training among massively distributed clients by sharing their learned local model parameters. However, with increasing model size, deploying federated learning requires a large communication bandwidth, which limits its deployment in wireless networks. To address this bottleneck, we introduce a residual-based federated learning framework (ResFed), where residuals rather than model parameters are transmitted in communication networks for training. In particular, we integrate two pairs of shared predictors for the model prediction in both server-to-client and client-to-server communication. By employing a common prediction rule, both locally and globally updated models are always fully recoverable in clients and the server. We highlight that the residuals only indicate the quasi-update of a model in a single inter-round, and hence contain more dense information and have a lower entropy than the model, comparing to model weights and gradients. Based on this property, we further conduct lossy compression of the residuals by sparsification and quantization and encode them for efficient communication. The experimental evaluation shows that our ResFed needs remarkably less communication costs and achieves better accuracy by leveraging less sensitive residuals, compared to standard federated learning. For instance, to train a 4.08 MB CNN model on CIFAR-10 with 10 clients under non-independent and identically distributed (Non-IID) setting, our approach achieves a compression ratio over 700X in each communication round with minimum impact on the accuracy. To reach an accuracy of 70%, it saves around 99% of the total communication volume from 587.61 Mb to 6.79 Mb in up-streaming and to 4.61 Mb in down-streaming on average for all clients.
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Generalist models, which are capable of performing diverse multi-modal tasks in a task-agnostic way within a single model, have been explored recently. Being, hopefully, an alternative to approaching general-purpose AI, existing generalist models are still at an early stage, where modality and task coverage is limited. To empower multi-modal task-scaling and speed up this line of research, we release a generalist model learning system, OFASys, built on top of a declarative task interface named multi-modal instruction. At the core of OFASys is the idea of decoupling multi-modal task representations from the underlying model implementations. In OFASys, a task involving multiple modalities can be defined declaratively even with just a single line of code. The system automatically generates task plans from such instructions for training and inference. It also facilitates multi-task training for diverse multi-modal workloads. As a starting point, we provide presets of 7 different modalities and 23 highly-diverse example tasks in OFASys, with which we also develop a first-in-kind, single model, OFA+, that can handle text, image, speech, video, and motion data. The single OFA+ model achieves 95% performance in average with only 16% parameters of 15 task-finetuned models, showcasing the performance reliability of multi-modal task-scaling provided by OFASys. Available at https://github.com/OFA-Sys/OFASys
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Parsing natural language questions into executable logical forms is a useful and interpretable way to perform question answering on structured data such as knowledge bases (KB) or databases (DB). However, existing approaches on semantic parsing cannot adapt to both modalities, as they suffer from the exponential growth of the logical form candidates and can hardly generalize to unseen data. In this work, we propose Uni-Parser, a unified semantic parser for question answering (QA) on both KB and DB. We introduce the primitive (relation and entity in KB, and table name, column name and cell value in DB) as an essential element in our framework. The number of primitives grows linearly with the number of retrieved relations in KB and DB, preventing us from dealing with exponential logic form candidates. We leverage the generator to predict final logical forms by altering and composing topranked primitives with different operations (e.g. select, where, count). With sufficiently pruned search space by a contrastive primitive ranker, the generator is empowered to capture the composition of primitives enhancing its generalization ability. We achieve competitive results on multiple KB and DB QA benchmarks more efficiently, especially in the compositional and zero-shot settings.
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Large language models (LLMs) have been shown to be able to perform new tasks based on a few demonstrations or natural language instructions. While these capabilities have led to widespread adoption, most LLMs are developed by resource-rich organizations and are frequently kept from the public. As a step towards democratizing this powerful technology, we present BLOOM, a 176B-parameter open-access language model designed and built thanks to a collaboration of hundreds of researchers. BLOOM is a decoder-only Transformer language model that was trained on the ROOTS corpus, a dataset comprising hundreds of sources in 46 natural and 13 programming languages (59 in total). We find that BLOOM achieves competitive performance on a wide variety of benchmarks, with stronger results after undergoing multitask prompted finetuning. To facilitate future research and applications using LLMs, we publicly release our models and code under the Responsible AI License.
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Recent works on Lottery Ticket Hypothesis have shown that pre-trained language models (PLMs) contain smaller matching subnetworks(winning tickets) which are capable of reaching accuracy comparable to the original models. However, these tickets are proved to be notrobust to adversarial examples, and even worse than their PLM counterparts. To address this problem, we propose a novel method based on learning binary weight masks to identify robust tickets hidden in the original PLMs. Since the loss is not differentiable for the binary mask, we assign the hard concrete distribution to the masks and encourage their sparsity using a smoothing approximation of L0 regularization.Furthermore, we design an adversarial loss objective to guide the search for robust tickets and ensure that the tickets perform well bothin accuracy and robustness. Experimental results show the significant improvement of the proposed method over previous work on adversarial robustness evaluation.
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在这项工作中,我们研究了基于价值的深钢筋学习(DRL)中简单但普遍适用的奖励成型案例。我们表明,线性转换形式的奖励转移等同于更改函数近似中$ q $ function的初始化。基于这样的等价性,我们带来了关键的见解,即积极的奖励转移会导致保守的剥削,而负面的奖励转移会导致好奇心驱动的探索。因此,保守的剥削改善了离线RL价值估计,乐观的价值估计改善了在线RL的勘探。我们验证了对一系列RL任务的见解,并显示了其对基准的改进:(1)在离线RL中,保守的剥削可根据现成的算法提高性能; (2)在在线连续控制中,具有不同转移常数的多个值函数可用于应对探索 - 诠释困境,以提高样品效率; (3)在离散控制任务中,负奖励转移可以改善基于好奇心的探索方法。
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